I still don't know but found instead an interesting reddit post were users found and analyzed this "waste of space" three month ago.
https://www.reddit.com/r/Helldivers/comments/1mw3qcx/why_the...
PS: just found it. According to this Steam discussion it does not download the duplicate data and back then it only blew up to ~70 GB.
https://steamcommunity.com/app/553850/discussions/0/43725019...
That being said, cartridges were fast. The move away from cartridges was a wrong turn
https://www.arrowheadgamestudios.com/2025/10/helldivers-2-te...
That does force you to duplicate some assets a lot. It's also more important the slower your seeks are. This technique is perfect for disc media, since it has a fixed physical size (so wasting space on it is irrelevant) and slow seeks.